Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SPDYE9P-201ENST00000570642 692 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.45□□□□□ -0.58
IFNA1P01562 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 SPDYE10P-202ENST00000612005 668 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 SPDYE8P-202ENST00000612377 668 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.45□□□□□ -0.58
IFNA1P01562 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 UXT-AS1-201ENST00000590504 1525 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 AC022497.1-201ENST00000624916 3691 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 AC073869.1-201ENST00000415574 2762 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 AC060814.4-201ENST00000594169 2163 ntBASIC11.44□□□□□ -0.58
IFNA1P01562 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 AL109976.1-201ENST00000621919 5678 ntBASIC11.44□□□□□ -0.58
IFNA1P01562 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 YBX2P1-201ENST00000394192 760 ntBASIC11.44□□□□□ -0.58
IFNA1P01562 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.44□□□□□ -0.58
IFNA1P01562 AC003958.1-201ENST00000435883 421 ntBASIC11.44□□□□□ -0.58
IFNA1P01562 HCG4P8-203ENST00000443049 980 ntBASIC11.44□□□□□ -0.58
IFNA1P01562 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.44□□□□□ -0.58
IFNA1P01562 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.44□□□□□ -0.58
IFNA1P01562 BAP1-211ENST00000615113 489 ntBASIC11.44□□□□□ -0.58
IFNA1P01562 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 GHET1-201ENST00000627071 1906 ntBASIC11.44□□□□□ -0.58
IFNA1P01562 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 STX16-202ENST00000355957 4897 ntTSL 2 BASIC11.44□□□□□ -0.58
IFNA1P01562 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.44□□□□□ -0.58
IFNA1P01562 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
IFNA1P01562 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
IFNA1P01562 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.43□□□□□ -0.58
IFNA1P01562 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 PCDHA6-201ENST00000378126 3267 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms