Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 GH1-203ENST00000351388 685 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 MIR611-201ENST00000384869 67 ntBASIC14.25□□□□□ -0.13
PDGFBP01127 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PDGFBP01127 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PDGFBP01127 ZNF877P-201ENST00000437614 612 ntBASIC14.25□□□□□ -0.13
PDGFBP01127 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 RN7SL173P-201ENST00000461853 292 ntBASIC14.25□□□□□ -0.13
PDGFBP01127 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 SNRPD2P2-201ENST00000473818 333 ntBASIC14.25□□□□□ -0.13
PDGFBP01127 GOLGA2P8-201ENST00000505201 779 ntBASIC14.25□□□□□ -0.13
PDGFBP01127 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.25□□□□□ -0.13
PDGFBP01127 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.25□□□□□ -0.13
PDGFBP01127 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.24□□□□□ -0.13
PDGFBP01127 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
PDGFBP01127 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
PDGFBP01127 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.24□□□□□ -0.13
PDGFBP01127 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
PDGFBP01127 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFBP01127 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.24□□□□□ -0.13
PDGFBP01127 HMGA1P2-201ENST00000430198 324 ntBASIC14.24□□□□□ -0.13
PDGFBP01127 AL356000.1-201ENST00000441073 1238 ntBASIC14.24□□□□□ -0.13
PDGFBP01127 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.24□□□□□ -0.13
PDGFBP01127 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PDGFBP01127 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFBP01127 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC14.24□□□□□ -0.13
PDGFBP01127 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC14.24□□□□□ -0.13
PDGFBP01127 RN7SL440P-201ENST00000577855 343 ntBASIC14.24□□□□□ -0.13
PDGFBP01127 RN7SL455P-201ENST00000580629 282 ntBASIC14.24□□□□□ -0.13
PDGFBP01127 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC14.24□□□□□ -0.13
PDGFBP01127 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.24□□□□□ -0.13
PDGFBP01127 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC14.24□□□□□ -0.13
PDGFBP01127 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PDGFBP01127 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 AC020658.6-201ENST00000623564 1870 ntBASIC14.24□□□□□ -0.13
PDGFBP01127 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PDGFBP01127 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 KRT8P43-201ENST00000406052 1458 ntBASIC14.24□□□□□ -0.13
PDGFBP01127 FAM226B-201ENST00000602508 1490 ntBASIC14.24□□□□□ -0.13
PDGFBP01127 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PDGFBP01127 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDGFBP01127 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 ABCD1P4-201ENST00000399687 604 ntBASIC14.23□□□□□ -0.13
PDGFBP01127 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.23□□□□□ -0.13
PDGFBP01127 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 RPSAP12-201ENST00000435879 888 ntBASIC14.23□□□□□ -0.13
PDGFBP01127 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 AC133141.1-201ENST00000443015 339 ntBASIC14.23□□□□□ -0.13
PDGFBP01127 AL136084.1-201ENST00000449172 318 ntBASIC14.23□□□□□ -0.13
PDGFBP01127 HNRNPA3P6-201ENST00000472163 1006 ntBASIC14.23□□□□□ -0.13
PDGFBP01127 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC14.23□□□□□ -0.13
PDGFBP01127 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 EEF1DP7-201ENST00000580496 513 ntBASIC14.23□□□□□ -0.13
PDGFBP01127 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 KF455155.1-201ENST00000604493 303 ntBASIC14.23□□□□□ -0.13
PDGFBP01127 AL031673.1-201ENST00000611460 466 ntBASIC14.23□□□□□ -0.13
PDGFBP01127 AC010503.4-201ENST00000615487 688 ntBASIC14.23□□□□□ -0.13
PDGFBP01127 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms