Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 KRT8P21-201ENST00000430398 1491 ntBASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AC073150.1-201ENST00000450406 1084 ntBASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AC103988.2-201ENST00000561804 725 ntBASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AL353770.1-201ENST00000614915 403 ntBASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AC133540.1-201ENST00000620845 1019 ntBASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AC087386.2-201ENST00000623212 4637 ntBASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA2E9PIF3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 AC239868.1-201ENST00000369385 493 ntBASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 PDIA3P2-201ENST00000428073 158 ntBASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 AC234782.1-201ENST00000451950 919 ntBASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms