Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.68□□□□□ -0.7
NACAE9PAV3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NACAE9PAV3 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NACAE9PAV3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NACAE9PAV3 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC10.68□□□□□ -0.7
NACAE9PAV3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
NACAE9PAV3 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
NACAE9PAV3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
NACAE9PAV3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.67□□□□□ -0.7
NACAE9PAV3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.67□□□□□ -0.7
NACAE9PAV3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC10.67□□□□□ -0.7
NACAE9PAV3 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.67□□□□□ -0.7
NACAE9PAV3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC10.67□□□□□ -0.7
NACAE9PAV3 AC133552.6-201ENST00000613406 534 ntBASIC10.67□□□□□ -0.7
NACAE9PAV3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC10.67□□□□□ -0.7
NACAE9PAV3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
NACAE9PAV3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
NACAE9PAV3 BAATP1-201ENST00000412284 1225 ntBASIC10.67□□□□□ -0.7
NACAE9PAV3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 AC092658.1-201ENST00000505836 891 ntBASIC10.67□□□□□ -0.7
NACAE9PAV3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC10.67□□□□□ -0.7
NACAE9PAV3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.67□□□□□ -0.7
NACAE9PAV3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.67□□□□□ -0.7
NACAE9PAV3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
NACAE9PAV3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC10.67□□□□□ -0.7
NACAE9PAV3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
NACAE9PAV3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 AL590440.2-201ENST00000641973 1595 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
NACAE9PAV3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
NACAE9PAV3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms