Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AC078875.1-201ENST00000431907 724 ntBASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 OR2R1P-201ENST00000441404 914 ntBASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AC134698.3-201ENST00000523880 214 ntBASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AC009779.1-201ENST00000551138 283 ntBASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 MIR3907-201ENST00000579424 151 ntBASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AL132994.2-201ENST00000603120 687 ntBASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 CASP16P-204ENST00000635032 809 ntBASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 LAP3P2-201ENST00000454686 1454 ntBASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAI2Q9Y5P3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 AC007326.2-201ENST00000624224 7579 ntBASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 MIR769-201ENST00000390225 118 ntBASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 AC016700.1-201ENST00000429424 312 ntBASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 SPTLC1P5-201ENST00000450718 252 ntBASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 MARK2P5-201ENST00000507649 634 ntBASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 FGFR3P5-201ENST00000564496 886 ntBASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 AL353726.2-201ENST00000623259 884 ntBASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms