Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.83□□□□□ -0.36
DUX4Q9UBX2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 MSTO2P-201ENST00000314835 1709 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 REXO1L4P-201ENST00000605109 1937 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AP000845.1-201ENST00000581677 2131 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AL157414.3-201ENST00000624276 1954 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 COX5BP8-201ENST00000416911 349 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 SOCS2P1-201ENST00000417727 557 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 RN7SL837P-201ENST00000463010 287 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AC027307.3-201ENST00000594262 1100 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AC012645.4-201ENST00000610691 1061 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 IGHV3-72-202ENST00000621503 303 ntBASIC12.82□□□□□ -0.36
DUX4Q9UBX2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUX4Q9UBX2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 AC005225.4-201ENST00000557330 545 ntBASIC12.81□□□□□ -0.36
DUX4Q9UBX2 SAMD11P1-201ENST00000571429 661 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms