Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 FAM204CP-201ENST00000424489 642 ntBASIC17.33■□□□□ 0.36
RTN4Q9NQC3 AL096677.1-201ENST00000442884 814 ntTSL 3 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 NOC2LP1-201ENST00000450578 752 ntBASIC17.33■□□□□ 0.36
RTN4Q9NQC3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 AC122713.1-201ENST00000518368 1015 ntBASIC17.33■□□□□ 0.36
RTN4Q9NQC3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC17.33■□□□□ 0.36
RTN4Q9NQC3 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 AL139010.1-201ENST00000454878 894 ntBASIC17.32■□□□□ 0.36
RTN4Q9NQC3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 AP003168.1-201ENST00000530091 307 ntBASIC17.32■□□□□ 0.36
RTN4Q9NQC3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 HNRNPUP1-201ENST00000554987 333 ntBASIC17.32■□□□□ 0.36
RTN4Q9NQC3 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 AC243562.1-201ENST00000560672 389 ntBASIC17.32■□□□□ 0.36
RTN4Q9NQC3 LINC01225-203ENST00000563550 1244 ntBASIC17.32■□□□□ 0.36
RTN4Q9NQC3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RTN4Q9NQC3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 DDX12P-201ENST00000432996 2947 ntBASIC17.31■□□□□ 0.36
RTN4Q9NQC3 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 IL9RP2-201ENST00000423948 1312 ntBASIC17.31■□□□□ 0.36
RTN4Q9NQC3 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 ADH5P3-201ENST00000433842 1137 ntBASIC17.31■□□□□ 0.36
RTN4Q9NQC3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 AP000842.3-202ENST00000569238 1080 ntBASIC17.31■□□□□ 0.36
RTN4Q9NQC3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 AC091812.2-201ENST00000619081 385 ntBASIC17.31■□□□□ 0.36
RTN4Q9NQC3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms