Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM4Q9C037 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM4Q9C037 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM4Q9C037 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM4Q9C037 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM4Q9C037 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM4Q9C037 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM4Q9C037 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM4Q9C037 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM4Q9C037 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRIM4Q9C037 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 AL162726.2-201ENST00000438986 1017 ntBASIC14.62□□□□□ -0.07
TRIM4Q9C037 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.62□□□□□ -0.07
TRIM4Q9C037 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 AP001889.1-201ENST00000525414 633 ntBASIC14.62□□□□□ -0.07
TRIM4Q9C037 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 AP001258.2-201ENST00000529891 490 ntBASIC14.62□□□□□ -0.07
TRIM4Q9C037 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 AL022328.3-201ENST00000607943 679 ntBASIC14.62□□□□□ -0.07
TRIM4Q9C037 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.62□□□□□ -0.07
TRIM4Q9C037 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM4Q9C037 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 AP000845.1-201ENST00000581677 2131 ntBASIC14.62□□□□□ -0.07
TRIM4Q9C037 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.62□□□□□ -0.07
TRIM4Q9C037 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM4Q9C037 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 TOMM22P5-201ENST00000416399 439 ntBASIC14.61□□□□□ -0.07
TRIM4Q9C037 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM4Q9C037 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM4Q9C037 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms