Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 CNN2P10-201ENST00000443067 918 ntBASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AC005695.3-201ENST00000614522 232 ntBASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AL008638.5-201ENST00000623814 1298 ntBASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AL139099.5-201ENST00000635274 300 ntBASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRAF4Q9BUZ4 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 RPSAP36-202ENST00000494591 1261 ntBASIC13□□□□□ -0.33
TRAF4Q9BUZ4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms