Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AGAP12P-201ENST00000585227 2359 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 ECM1P1-201ENST00000604092 1279 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AL356585.2-201ENST00000625078 2396 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AL033527.5-201ENST00000641382 801 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AC114271.1-201ENST00000612689 2813 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 BAATP1-201ENST00000412284 1225 ntBASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 AC106820.3-201ENST00000561653 397 ntBASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 RN7SL48P-201ENST00000579283 293 ntBASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 MIR4683-201ENST00000579659 81 ntBASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 RPSAP52-203ENST00000622976 1023 ntBASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HDHD3Q9BSH5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms