Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC106820.3-201ENST00000561653 397 ntBASIC13.16□□□□□ -0.3
USB1Q9BQ65 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 MIR4525-201ENST00000580000 75 ntBASIC13.16□□□□□ -0.3
USB1Q9BQ65 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AC084782.3-201ENST00000612282 578 ntBASIC13.16□□□□□ -0.3
USB1Q9BQ65 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AP000845.1-201ENST00000581677 2131 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 POM121L10P-201ENST00000436994 1285 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 FAM58BP-201ENST00000439056 645 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AC137549.1-201ENST00000514243 533 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AC103810.3-201ENST00000583567 96 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 OR10B1P-201ENST00000601666 907 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AC009542.2-202ENST00000619004 1067 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AGAP7P-201ENST00000582299 2062 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 AGAP14-201ENST00000624701 2060 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 KRT8P44-201ENST00000441609 1350 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 AC020907.1-201ENST00000616460 1350 ntBASIC13.15□□□□□ -0.3
USB1Q9BQ65 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
USB1Q9BQ65 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
USB1Q9BQ65 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
USB1Q9BQ65 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
USB1Q9BQ65 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms