Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
VGLL1Q99990 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
VGLL1Q99990 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
VGLL1Q99990 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 ACKR1-201ENST00000368121 1240 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.03□□□□□ -0.64
VGLL1Q99990 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.03□□□□□ -0.64
VGLL1Q99990 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.03□□□□□ -0.64
VGLL1Q99990 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 MYCLP2-201ENST00000449268 967 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 RNA5SP421-201ENST00000516864 134 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 MIR497HG-202ENST00000572453 3838 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 CLUHP6-201ENST00000580789 941 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 AC138696.2-201ENST00000607376 223 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.03□□□□□ -0.64
VGLL1Q99990 AC073548.1-201ENST00000624088 1882 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 AC015909.5-201ENST00000624336 2266 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 CLUHP2-201ENST00000426660 1303 ntBASIC11.03□□□□□ -0.64
VGLL1Q99990 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VGLL1Q99990 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
VGLL1Q99990 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.03□□□□□ -0.64
VGLL1Q99990 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms