Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GFI1Q99684 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFI1Q99684 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 LINC00567-201ENST00000569854 3409 ntBASIC12.43□□□□□ -0.42
GFI1Q99684 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
GFI1Q99684 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.43□□□□□ -0.42
GFI1Q99684 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.43□□□□□ -0.42
GFI1Q99684 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.43□□□□□ -0.42
GFI1Q99684 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 AL512638.1-201ENST00000457493 794 ntBASIC12.43□□□□□ -0.42
GFI1Q99684 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 ELK1P1-201ENST00000485699 580 ntBASIC12.43□□□□□ -0.42
GFI1Q99684 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.43□□□□□ -0.42
GFI1Q99684 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.43□□□□□ -0.42
GFI1Q99684 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.43□□□□□ -0.42
GFI1Q99684 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 RN7SL48P-201ENST00000579283 293 ntBASIC12.43□□□□□ -0.42
GFI1Q99684 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.43□□□□□ -0.42
GFI1Q99684 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFI1Q99684 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GFI1Q99684 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.42□□□□□ -0.42
GFI1Q99684 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
GFI1Q99684 Z98257.2-202ENST00000641138 1548 ntBASIC12.42□□□□□ -0.42
GFI1Q99684 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.42□□□□□ -0.42
GFI1Q99684 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.42□□□□□ -0.42
GFI1Q99684 VENTXP1-201ENST00000569334 2716 ntBASIC12.42□□□□□ -0.42
GFI1Q99684 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.42□□□□□ -0.42
GFI1Q99684 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.42□□□□□ -0.42
GFI1Q99684 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
GFI1Q99684 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GFI1Q99684 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GFI1Q99684 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.42□□□□□ -0.42
GFI1Q99684 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.42□□□□□ -0.42
GFI1Q99684 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.42□□□□□ -0.42
GFI1Q99684 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.42□□□□□ -0.42
GFI1Q99684 SPTLC1P1-201ENST00000447199 261 ntBASIC12.42□□□□□ -0.42
GFI1Q99684 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.42□□□□□ -0.42
GFI1Q99684 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFI1Q99684 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms