Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 BX088702.1-201ENST00000610784 235 ntBASIC13.26□□□□□ -0.29
SNX18Q96RF0 AP001002.3-201ENST00000623482 206 ntBASIC13.26□□□□□ -0.29
SNX18Q96RF0 CU634019.7-201ENST00000624153 1185 ntBASIC13.26□□□□□ -0.29
SNX18Q96RF0 FP236241.2-201ENST00000624906 1185 ntBASIC13.26□□□□□ -0.29
SNX18Q96RF0 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 INE2-201ENST00000630399 1874 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 AC020910.6-201ENST00000623084 1459 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 AL731571.1-201ENST00000617058 5428 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 MIR658-201ENST00000385210 100 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 FO681548.1-201ENST00000455617 1132 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 AC093433.1-201ENST00000458048 571 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 ACA64.2-201ENST00000459014 129 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 AC103988.2-201ENST00000561804 725 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 RN7SL48P-201ENST00000579283 293 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 MIR6805-201ENST00000615055 62 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 AL033527.5-201ENST00000641382 801 ntBASIC13.25□□□□□ -0.29
SNX18Q96RF0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.25□□□□□ -0.29
SNX18Q96RF0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNX18Q96RF0 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 MIR1909-201ENST00000411312 80 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms