Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AL928654.5-201ENST00000624831 2501 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 RPL13AP3-202ENST00000494676 1473 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AP002353.1-201ENST00000528257 1599 ntBASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AC004899.1-201ENST00000424687 1714 ntBASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AC015909.5-201ENST00000624336 2266 ntBASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 FAM86HP-204ENST00000513466 959 ntBASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AC008805.1-201ENST00000590892 364 ntBASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AC009542.2-202ENST00000619004 1067 ntBASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AL590824.1-201ENST00000403828 1349 ntBASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM5Q96HC4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AC073548.1-201ENST00000624088 1882 ntBASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 RNMTL1P1-201ENST00000454103 560 ntBASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 RPL13AP20-201ENST00000459725 609 ntBASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms