Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 AL354702.1-201ENST00000442006 1960 ntBASIC16.53■□□□□ 0.24
CDCA5Q96FF9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 AC103592.1-201ENST00000394513 664 ntBASIC16.53■□□□□ 0.24
CDCA5Q96FF9 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 GOLGA2P8-201ENST00000505201 779 ntBASIC16.53■□□□□ 0.24
CDCA5Q96FF9 TBC1D3P6-201ENST00000505954 962 ntBASIC16.53■□□□□ 0.24
CDCA5Q96FF9 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 AC080013.5-201ENST00000607044 679 ntBASIC16.53■□□□□ 0.24
CDCA5Q96FF9 CR392039.1-201ENST00000623217 204 ntBASIC16.53■□□□□ 0.24
CDCA5Q96FF9 AC010531.8-201ENST00000623341 685 ntBASIC16.53■□□□□ 0.24
CDCA5Q96FF9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA5Q96FF9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 AC068587.6-202ENST00000641839 5619 ntBASIC16.52■□□□□ 0.24
CDCA5Q96FF9 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 NQO2-204ENST00000380454 851 ntTSL 2 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 GPX3-202ENST00000517973 612 ntTSL 3 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 URB1-AS1-201ENST00000534991 831 ntBASIC16.52■□□□□ 0.24
CDCA5Q96FF9 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 AC113385.2-201ENST00000614465 762 ntBASIC16.52■□□□□ 0.24
CDCA5Q96FF9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA5Q96FF9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CDCA5Q96FF9 AC046158.3-201ENST00000624947 2558 ntBASIC16.52■□□□□ 0.23
CDCA5Q96FF9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA5Q96FF9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA5Q96FF9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA5Q96FF9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
CDCA5Q96FF9 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.52■□□□□ 0.23
CDCA5Q96FF9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA5Q96FF9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA5Q96FF9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
CDCA5Q96FF9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms