Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 NKAIN1P1-201ENST00000435754 582 ntBASIC12.67□□□□□ -0.38
TMEM54Q969K7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 AL157813.1-201ENST00000612996 587 ntBASIC12.67□□□□□ -0.38
TMEM54Q969K7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 AC023794.5-201ENST00000564380 2157 ntBASIC12.66□□□□□ -0.38
TMEM54Q969K7 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.66□□□□□ -0.38
TMEM54Q969K7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 TSPY25P-201ENST00000429463 745 ntBASIC12.66□□□□□ -0.38
TMEM54Q969K7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 RN7SL219P-201ENST00000582872 296 ntBASIC12.66□□□□□ -0.38
TMEM54Q969K7 AL022328.3-201ENST00000607943 679 ntBASIC12.66□□□□□ -0.38
TMEM54Q969K7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TMEM54Q969K7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TMEM54Q969K7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 AL590824.1-201ENST00000403828 1349 ntBASIC12.65□□□□□ -0.38
TMEM54Q969K7 LINC00115-201ENST00000473798 1317 ntBASIC12.65□□□□□ -0.38
TMEM54Q969K7 C8orf49-201ENST00000525043 1968 ntBASIC12.65□□□□□ -0.38
TMEM54Q969K7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms