Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 SPDYE18-201ENST00000510091 1050 ntBASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 AC005498.2-205ENST00000593218 784 ntBASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 AL390955.2-201ENST00000603032 514 ntBASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 BAP1-211ENST00000615113 489 ntBASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFWD2Q8NHY2 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFWD2Q8NHY2 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RFWD2Q8NHY2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFWD2Q8NHY2 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFWD2Q8NHY2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFWD2Q8NHY2 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RFWD2Q8NHY2 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RFWD2Q8NHY2 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 RN7SKP230-201ENST00000365642 335 ntBASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 CYMP-203ENST00000474680 1263 ntBASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 ZNF890P-202ENST00000530367 1156 ntBASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 AC027796.2-201ENST00000575326 344 ntBASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 AC093813.1-201ENST00000605066 256 ntBASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFWD2Q8NHY2 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 MKRN5P-201ENST00000445263 1467 ntBASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms