Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 AL008707.1-201ENST00000422498 534 ntBASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 AC134698.3-201ENST00000523880 214 ntBASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 MIR4783-201ENST00000580343 82 ntBASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 AL162426.1-201ENST00000624141 743 ntBASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 AC215219.1-201ENST00000400706 1817 ntBASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC33Q8N5R6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC33Q8N5R6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC33Q8N5R6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC33Q8N5R6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC33Q8N5R6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 MYADML-201ENST00000474610 2147 ntBASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 TUBB8P8-201ENST00000458717 1058 ntBASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 AC012618.1-201ENST00000461223 412 ntBASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 NUP210P1-202ENST00000504322 710 ntBASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 RN7SL574P-201ENST00000581512 297 ntBASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 AC152010.1-201ENST00000415779 2006 ntBASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC33Q8N5R6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 HSPA7-201ENST00000445535 1927 ntBASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 E2F3P2-201ENST00000447755 1422 ntBASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 AC024681.1-201ENST00000521917 487 ntBASIC15.19■□□□□ 0.02
CCDC33Q8N5R6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms