Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 AC105233.2-201ENST00000523697 349 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 FAM86C2P-203ENST00000528684 1004 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 AF228730.5-201ENST00000530288 346 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 KRT19P2-202ENST00000557173 1012 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 AC018845.2-201ENST00000568326 409 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 FAM197Y3-203ENST00000618346 717 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 AGGF1P10-201ENST00000635005 2191 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 TUBB8P4-201ENST00000511806 1324 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 CSPG4P12-201ENST00000558282 4853 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 TRIM80P-201ENST00000455685 2848 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AC060814.4-201ENST00000594169 2163 ntBASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 MIR940-201ENST00000401276 94 ntBASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 PDPK2P-202ENST00000562415 1191 ntBASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 SAMD11P1-201ENST00000571429 661 ntBASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AC073389.1-201ENST00000595595 795 ntBASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 PCDHA6-201ENST00000378126 3267 ntBASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AL360270.3-201ENST00000609118 1348 ntBASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AC012531.1-201ENST00000562848 2680 ntBASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 FN1-206ENST00000359671 8524 ntTSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms