Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.08■□□□□ 0.01
RFWD3Q6PCD5 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.08■□□□□ 0
RFWD3Q6PCD5 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 AC009779.1-201ENST00000551138 283 ntBASIC15.08■□□□□ 0
RFWD3Q6PCD5 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.08■□□□□ 0
RFWD3Q6PCD5 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.08■□□□□ 0
RFWD3Q6PCD5 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 PPT1-213ENST00000641319 2388 ntBASIC15.08■□□□□ 0
RFWD3Q6PCD5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFWD3Q6PCD5 AGGF1P1-201ENST00000509500 2073 ntBASIC15.08■□□□□ 0
RFWD3Q6PCD5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFWD3Q6PCD5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFWD3Q6PCD5 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFWD3Q6PCD5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD3Q6PCD5 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD3Q6PCD5 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD3Q6PCD5 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.08■□□□□ 0
RFWD3Q6PCD5 AC005562.1-201ENST00000583030 3219 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms