Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC00552-201ENST00000625151 2579 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 GUCY2EP-203ENST00000531117 1918 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 GPX3-202ENST00000517973 612 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 GRAMD4P6-201ENST00000556999 244 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AC087072.1-201ENST00000603727 421 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AC008620.2-201ENST00000510294 1569 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 FAU-201ENST00000279259 461 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 RPL4P6-201ENST00000438116 1304 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 DNM1P46-202ENST00000415963 882 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 KRT18P44-201ENST00000416086 1285 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 SLC25A15P1-201ENST00000456738 342 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 HNRNPA1P56-201ENST00000505767 954 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 BX640514.1-201ENST00000583223 1918 ntBASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AP001331.1-201ENST00000413008 1015 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 MIR3940-201ENST00000579148 102 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 KRT8P42-201ENST00000405771 1399 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 USP17L6P-201ENST00000382470 1197 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 GULOP-201ENST00000454030 748 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms