Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 AL355102.3-201ENST00000554299 1678 ntBASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 DLX4-206ENST00000611342 1662 ntBASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.05□□□□□ -0.48
ANKRD55Q3KP44 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 RNU1-114P-201ENST00000365297 166 ntBASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 EIF3FP3-201ENST00000434851 1086 ntBASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AL096865.1-201ENST00000606796 927 ntBASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AL662799.1-202ENST00000614205 422 ntBASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AL445250.1-201ENST00000641671 2259 ntBASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AC087499.5-201ENST00000452760 1342 ntBASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AC064801.2-201ENST00000625052 1303 ntBASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AC009474.1-201ENST00000455096 1565 ntBASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 LINC00567-201ENST00000569854 3409 ntBASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ANKRD55Q3KP44 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AC100757.3-201ENST00000622361 1406 ntBASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms