Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AP005212.2-201ENST00000584979 510 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.25■□□□□ 0.19
CCNA1P78396 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNA1P78396 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.25■□□□□ 0.19
CCNA1P78396 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CCNA1P78396 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNA1P78396 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCNA1P78396 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCNA1P78396 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 AL672207.1-201ENST00000328462 1570 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 FUCA1P1-201ENST00000374476 1351 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNA1P78396 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCNA1P78396 AC019109.1-201ENST00000401725 1874 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.24■□□□□ 0.19
CCNA1P78396 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCNA1P78396 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCNA1P78396 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.24■□□□□ 0.19
CCNA1P78396 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CCNA1P78396 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCNA1P78396 OR51A9P-201ENST00000422578 911 ntBASIC16.24■□□□□ 0.19
CCNA1P78396 KRT17P4-201ENST00000429445 819 ntBASIC16.24■□□□□ 0.19
CCNA1P78396 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.24■□□□□ 0.19
CCNA1P78396 AC006529.1-201ENST00000459978 637 ntBASIC16.24■□□□□ 0.19
CCNA1P78396 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.24■□□□□ 0.19
CCNA1P78396 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.24■□□□□ 0.19
CCNA1P78396 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.24■□□□□ 0.19
CCNA1P78396 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.24■□□□□ 0.19
CCNA1P78396 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 AC006483.2-201ENST00000609813 515 ntBASIC16.24■□□□□ 0.19
CCNA1P78396 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.24■□□□□ 0.19
CCNA1P78396 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 KRT8P18-201ENST00000413425 1445 ntBASIC16.24■□□□□ 0.19
CCNA1P78396 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CCNA1P78396 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CCNA1P78396 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNA1P78396 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNA1P78396 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
CCNA1P78396 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.23■□□□□ 0.19
CCNA1P78396 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 OR7E115P-201ENST00000382617 1024 ntBASIC16.23■□□□□ 0.19
CCNA1P78396 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.23■□□□□ 0.19
CCNA1P78396 AP000354.1-201ENST00000396982 456 ntBASIC16.23■□□□□ 0.19
CCNA1P78396 AC108734.2-201ENST00000420887 1069 ntBASIC16.23■□□□□ 0.19
CCNA1P78396 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCNA1P78396 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 RN7SL582P-201ENST00000491078 279 ntBASIC16.23■□□□□ 0.19
CCNA1P78396 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.23■□□□□ 0.19
CCNA1P78396 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 PEBP1P2-201ENST00000603980 558 ntBASIC16.23■□□□□ 0.19
CCNA1P78396 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CCNA1P78396 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCNA1P78396 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 AJ011931.1-201ENST00000618749 2492 ntBASIC16.23■□□□□ 0.19
CCNA1P78396 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms