Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.42□□□□□ -0.42
ABCA4P78363 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
ABCA4P78363 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ABCA4P78363 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ABCA4P78363 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ABCA4P78363 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
ABCA4P78363 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.42□□□□□ -0.42
ABCA4P78363 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 LINC02228-204ENST00000642115 2962 ntBASIC12.42□□□□□ -0.42
ABCA4P78363 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ABCA4P78363 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ABCA4P78363 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ABCA4P78363 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.42□□□□□ -0.42
ABCA4P78363 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.41□□□□□ -0.42
ABCA4P78363 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.41□□□□□ -0.42
ABCA4P78363 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ABCA4P78363 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ABCA4P78363 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ABCA4P78363 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 AQP7P5-201ENST00000428759 1049 ntBASIC12.41□□□□□ -0.42
ABCA4P78363 AQP7P4-201ENST00000447083 1042 ntBASIC12.41□□□□□ -0.42
ABCA4P78363 AQP7P2-201ENST00000453967 1041 ntBASIC12.41□□□□□ -0.42
ABCA4P78363 AC244197.1-201ENST00000456494 951 ntBASIC12.41□□□□□ -0.42
ABCA4P78363 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
ABCA4P78363 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 AC011247.3-201ENST00000603297 438 ntBASIC12.41□□□□□ -0.42
ABCA4P78363 AC007326.1-201ENST00000604539 458 ntBASIC12.41□□□□□ -0.42
ABCA4P78363 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 AQP7P3-201ENST00000624547 1041 ntBASIC12.41□□□□□ -0.42
ABCA4P78363 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 AC092135.3-201ENST00000624151 1846 ntBASIC12.41□□□□□ -0.42
ABCA4P78363 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ABCA4P78363 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ABCA4P78363 ACE3P-201ENST00000423435 1973 ntBASIC12.41□□□□□ -0.42
ABCA4P78363 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
ABCA4P78363 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ABCA4P78363 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ABCA4P78363 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ABCA4P78363 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms