Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
GABREP78334 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.69□□□□□ -0.22
GABREP78334 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.69□□□□□ -0.22
GABREP78334 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.69□□□□□ -0.22
GABREP78334 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.69□□□□□ -0.22
GABREP78334 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
GABREP78334 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABREP78334 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
GABREP78334 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.68□□□□□ -0.22
GABREP78334 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.68□□□□□ -0.22
GABREP78334 AC139712.1-201ENST00000378256 1875 ntBASIC13.68□□□□□ -0.22
GABREP78334 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC13.68□□□□□ -0.22
GABREP78334 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GABREP78334 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.68□□□□□ -0.22
GABREP78334 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.68□□□□□ -0.22
GABREP78334 RPL35P9-201ENST00000446059 350 ntBASIC13.68□□□□□ -0.22
GABREP78334 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.68□□□□□ -0.22
GABREP78334 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 AC068867.1-201ENST00000559855 150 ntBASIC13.68□□□□□ -0.22
GABREP78334 AC007250.1-201ENST00000608934 338 ntBASIC13.68□□□□□ -0.22
GABREP78334 AP001527.2-201ENST00000614441 631 ntBASIC13.68□□□□□ -0.22
GABREP78334 AC009145.4-201ENST00000625119 1294 ntBASIC13.68□□□□□ -0.22
GABREP78334 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 AC002472.4-201ENST00000641915 272 ntBASIC13.68□□□□□ -0.22
GABREP78334 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.68□□□□□ -0.22
GABREP78334 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
GABREP78334 AC021305.1-201ENST00000520656 1514 ntBASIC13.68□□□□□ -0.22
GABREP78334 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABREP78334 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
GABREP78334 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GABREP78334 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GABREP78334 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.67□□□□□ -0.22
GABREP78334 CTBP2P8-201ENST00000422584 1330 ntBASIC13.67□□□□□ -0.22
GABREP78334 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 PYY2-201ENST00000315776 282 ntBASIC13.67□□□□□ -0.22
GABREP78334 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.67□□□□□ -0.22
GABREP78334 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 KRT17P4-201ENST00000429445 819 ntBASIC13.67□□□□□ -0.22
GABREP78334 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 AC098934.1-203ENST00000442868 1262 ntBASIC13.67□□□□□ -0.22
GABREP78334 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.67□□□□□ -0.22
GABREP78334 PGAM1P12-201ENST00000505622 748 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms