Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ANKRD19P-201ENST00000338192 862 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CLRN1P58418 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.95□□□□□ -0.34
CLRN1P58418 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CLRN1P58418 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.95□□□□□ -0.34
CLRN1P58418 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.95□□□□□ -0.34
CLRN1P58418 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.95□□□□□ -0.34
CLRN1P58418 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.95□□□□□ -0.34
CLRN1P58418 HLA-V-201ENST00000429037 534 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.95□□□□□ -0.34
CLRN1P58418 AL161932.2-201ENST00000435436 679 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.95□□□□□ -0.34
CLRN1P58418 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.95□□□□□ -0.34
CLRN1P58418 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.95□□□□□ -0.34
CLRN1P58418 AC100850.1-201ENST00000506768 649 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.95□□□□□ -0.34
CLRN1P58418 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CLRN1P58418 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.95□□□□□ -0.34
CLRN1P58418 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.95□□□□□ -0.34
CLRN1P58418 HILS1-202ENST00000545329 423 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.95□□□□□ -0.34
CLRN1P58418 AP005482.1-201ENST00000563722 1273 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 MIR4741-201ENST00000579822 90 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 MIR6720-201ENST00000611664 98 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 AC244157.2-201ENST00000616239 1006 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 MIR6775-201ENST00000617557 69 ntBASIC12.95□□□□□ -0.34
CLRN1P58418 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.95□□□□□ -0.34
CLRN1P58418 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.95□□□□□ -0.34
CLRN1P58418 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.95□□□□□ -0.34
CLRN1P58418 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CLRN1P58418 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CLRN1P58418 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.95□□□□□ -0.34
CLRN1P58418 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CLRN1P58418 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLRN1P58418 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 TUBB8P4-201ENST00000511806 1324 ntBASIC12.94□□□□□ -0.34
CLRN1P58418 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.94□□□□□ -0.34
CLRN1P58418 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CLRN1P58418 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CLRN1P58418 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CLRN1P58418 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.94□□□□□ -0.34
CLRN1P58418 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.94□□□□□ -0.34
CLRN1P58418 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 CSF2RBP1-201ENST00000447905 391 ntBASIC12.94□□□□□ -0.34
CLRN1P58418 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.94□□□□□ -0.34
CLRN1P58418 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 RBM8B-201ENST00000555532 525 ntBASIC12.94□□□□□ -0.34
CLRN1P58418 AC100827.2-201ENST00000563214 1194 ntBASIC12.94□□□□□ -0.34
CLRN1P58418 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 AC017083.2-201ENST00000608069 979 ntBASIC12.94□□□□□ -0.34
CLRN1P58418 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 PTENP1-202ENST00000532280 3996 ntBASIC12.94□□□□□ -0.34
CLRN1P58418 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.94□□□□□ -0.34
CLRN1P58418 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.94□□□□□ -0.34
CLRN1P58418 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLRN1P58418 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLRN1P58418 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms