Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC092506.1-202ENST00000401022 528 ntBASIC10.59□□□□□ -0.71
APOC4P55056 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC10.59□□□□□ -0.71
APOC4P55056 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 CMC1-204ENST00000423894 549 ntTSL 2 BASIC10.59□□□□□ -0.71
APOC4P55056 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC10.59□□□□□ -0.71
APOC4P55056 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.59□□□□□ -0.71
APOC4P55056 IMP3P2-201ENST00000489760 475 ntBASIC10.59□□□□□ -0.71
APOC4P55056 RHEB-207ENST00000496004 744 ntTSL 2 BASIC10.59□□□□□ -0.71
APOC4P55056 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 TPM1-223ENST00000560445 485 ntTSL 3 BASIC10.59□□□□□ -0.71
APOC4P55056 STUB1-204ENST00000564370 875 ntTSL 2 BASIC10.59□□□□□ -0.71
APOC4P55056 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.59□□□□□ -0.71
APOC4P55056 AC084346.2-201ENST00000607097 949 ntBASIC10.59□□□□□ -0.71
APOC4P55056 AC090386.2-201ENST00000623010 1039 ntBASIC10.59□□□□□ -0.71
APOC4P55056 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
APOC4P55056 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
APOC4P55056 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.59□□□□□ -0.71
APOC4P55056 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
APOC4P55056 MYB-201ENST00000316528 3571 ntTSL 5 BASIC10.59□□□□□ -0.71
APOC4P55056 MYB-241ENST00000616088 3573 ntTSL 5 BASIC10.59□□□□□ -0.71
APOC4P55056 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
APOC4P55056 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 TBC1D3J-201ENST00000620719 1426 ntBASIC10.58□□□□□ -0.72
APOC4P55056 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
APOC4P55056 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 KRT8P19-201ENST00000551916 1455 ntBASIC10.58□□□□□ -0.72
APOC4P55056 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 PDIA3P2-201ENST00000428073 158 ntBASIC10.58□□□□□ -0.72
APOC4P55056 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 AC026320.2-201ENST00000434379 478 ntBASIC10.58□□□□□ -0.72
APOC4P55056 AC073150.1-201ENST00000450406 1084 ntBASIC10.58□□□□□ -0.72
APOC4P55056 DUX4L50-201ENST00000455245 715 ntBASIC10.58□□□□□ -0.72
APOC4P55056 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC10.58□□□□□ -0.72
APOC4P55056 IGLV3-15-201ENST00000518356 244 ntBASIC10.58□□□□□ -0.72
APOC4P55056 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.58□□□□□ -0.72
APOC4P55056 AC134698.3-201ENST00000523880 214 ntBASIC10.58□□□□□ -0.72
APOC4P55056 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
APOC4P55056 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 SKA2-205ENST00000580541 689 ntTSL 3 BASIC10.58□□□□□ -0.72
APOC4P55056 RN7SL574P-201ENST00000581512 297 ntBASIC10.58□□□□□ -0.72
APOC4P55056 MIR4754-201ENST00000582477 89 ntBASIC10.58□□□□□ -0.72
APOC4P55056 NAT9-220ENST00000582870 896 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC10.58□□□□□ -0.72
APOC4P55056 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC10.58□□□□□ -0.72
APOC4P55056 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 AC006453.1-201ENST00000636037 1257 ntBASIC10.58□□□□□ -0.72
APOC4P55056 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 PID1-202ENST00000392054 2745 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 CICP14-201ENST00000629111 2732 ntBASIC10.58□□□□□ -0.72
APOC4P55056 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms