Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
SLC25A1P53007 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.83□□□□□ -0.36
SLC25A1P53007 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SLC25A1P53007 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 AHCYP2-201ENST00000430630 1300 ntBASIC12.83□□□□□ -0.36
SLC25A1P53007 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SLC25A1P53007 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.83□□□□□ -0.36
SLC25A1P53007 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SLC25A1P53007 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC25A1P53007 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 AC068760.1-201ENST00000493579 1953 ntBASIC12.82□□□□□ -0.36
SLC25A1P53007 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SLC25A1P53007 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 MIR1202-201ENST00000408529 83 ntBASIC12.82□□□□□ -0.36
SLC25A1P53007 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.82□□□□□ -0.36
SLC25A1P53007 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 AL512310.5-201ENST00000551999 515 ntBASIC12.82□□□□□ -0.36
SLC25A1P53007 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.82□□□□□ -0.36
SLC25A1P53007 RBM8B-201ENST00000555532 525 ntBASIC12.82□□□□□ -0.36
SLC25A1P53007 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 MIR6720-201ENST00000611664 98 ntBASIC12.82□□□□□ -0.36
SLC25A1P53007 CR392039.2-201ENST00000623182 509 ntBASIC12.82□□□□□ -0.36
SLC25A1P53007 AC025048.6-201ENST00000634326 1161 ntBASIC12.82□□□□□ -0.36
SLC25A1P53007 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SLC25A1P53007 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SLC25A1P53007 AL359183.1-201ENST00000623796 2132 ntBASIC12.82□□□□□ -0.36
SLC25A1P53007 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SLC25A1P53007 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SLC25A1P53007 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SLC25A1P53007 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.81□□□□□ -0.36
SLC25A1P53007 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC25A1P53007 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SLC25A1P53007 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
SLC25A1P53007 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.81□□□□□ -0.36
SLC25A1P53007 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SLC25A1P53007 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC25A1P53007 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC25A1P53007 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC25A1P53007 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms