Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.16□□□□□ -0.3
HMGA2P52926 FAM207CP-201ENST00000443486 507 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
HMGA2P52926 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HMGA2P52926 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.16□□□□□ -0.3
HMGA2P52926 ECM1P1-201ENST00000604092 1279 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 AC021016.3-201ENST00000608367 477 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 AC023511.2-201ENST00000618803 211 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.16□□□□□ -0.3
HMGA2P52926 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 LINC01165-201ENST00000445190 1623 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 AC087386.2-201ENST00000623212 4637 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.16□□□□□ -0.3
HMGA2P52926 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.16□□□□□ -0.3
HMGA2P52926 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
HMGA2P52926 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 AP000437.1-201ENST00000624057 2085 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 AC010970.1-201ENST00000445125 1848 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
HMGA2P52926 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGA2P52926 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.15□□□□□ -0.3
HMGA2P52926 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGA2P52926 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGA2P52926 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 AC004623.1-201ENST00000624592 2127 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGA2P52926 Z98257.2-202ENST00000641138 1548 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
HMGA2P52926 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.15□□□□□ -0.3
HMGA2P52926 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HMGA2P52926 HMGA1P1-201ENST00000415560 1062 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.15□□□□□ -0.3
HMGA2P52926 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.15□□□□□ -0.3
HMGA2P52926 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HMGA2P52926 AP001889.1-201ENST00000525414 633 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 RFPL4AP1-201ENST00000530883 850 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 TDH-203ENST00000531764 1110 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
HMGA2P52926 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.15□□□□□ -0.3
HMGA2P52926 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.15□□□□□ -0.3
HMGA2P52926 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 RN7SL713P-201ENST00000582127 302 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGA2P52926 AC139530.3-201ENST00000620344 690 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
HMGA2P52926 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HMGA2P52926 AC026271.4-201ENST00000578214 1833 ntBASIC13.15□□□□□ -0.3
HMGA2P52926 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HMGA2P52926 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGA2P52926 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.15□□□□□ -0.3
HMGA2P52926 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGA2P52926 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HMGA2P52926 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.15□□□□□ -0.31
HMGA2P52926 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
HMGA2P52926 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HMGA2P52926 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 AC125807.2-201ENST00000513358 3514 ntBASIC13.14□□□□□ -0.31
HMGA2P52926 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
HMGA2P52926 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms