Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BRCA2P51587 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.58■□□□□ 0.08
BRCA2P51587 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRCA2P51587 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.58■□□□□ 0.08
BRCA2P51587 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
BRCA2P51587 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.58■□□□□ 0.08
BRCA2P51587 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
BRCA2P51587 AC215219.1-201ENST00000400706 1817 ntBASIC15.58■□□□□ 0.08
BRCA2P51587 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRCA2P51587 AL591499.1-201ENST00000307155 1153 ntBASIC15.58■□□□□ 0.08
BRCA2P51587 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.58■□□□□ 0.08
BRCA2P51587 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.58■□□□□ 0.08
BRCA2P51587 ABCD1P3-201ENST00000562927 605 ntBASIC15.58■□□□□ 0.08
BRCA2P51587 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC15.58■□□□□ 0.08
BRCA2P51587 RN7SL202P-201ENST00000584410 262 ntBASIC15.58■□□□□ 0.08
BRCA2P51587 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.58■□□□□ 0.08
BRCA2P51587 AC127002.1-201ENST00000619123 455 ntBASIC15.58■□□□□ 0.08
BRCA2P51587 AC018442.1-201ENST00000421439 2061 ntBASIC15.57■□□□□ 0.08
BRCA2P51587 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
BRCA2P51587 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.57■□□□□ 0.08
BRCA2P51587 MPV17-209ENST00000405983 859 ntTSL 5 BASIC15.57■□□□□ 0.08
BRCA2P51587 AL161932.2-201ENST00000435436 679 ntBASIC15.57■□□□□ 0.08
BRCA2P51587 PPY-202ENST00000587006 431 ntTSL 3 BASIC15.57■□□□□ 0.08
BRCA2P51587 AL049840.2-201ENST00000602722 535 ntBASIC15.57■□□□□ 0.08
BRCA2P51587 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
BRCA2P51587 AL031590.1-202ENST00000641466 1737 ntBASIC15.57■□□□□ 0.08
BRCA2P51587 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.57■□□□□ 0.08
BRCA2P51587 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
BRCA2P51587 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 POP5-201ENST00000341039 913 ntTSL 2 BASIC15.57■□□□□ 0.08
BRCA2P51587 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
BRCA2P51587 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC15.57■□□□□ 0.08
BRCA2P51587 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC15.57■□□□□ 0.08
BRCA2P51587 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC15.57■□□□□ 0.08
BRCA2P51587 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
BRCA2P51587 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
BRCA2P51587 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCA2P51587 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.56■□□□□ 0.08
BRCA2P51587 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.56■□□□□ 0.08
BRCA2P51587 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 AC006987.1-201ENST00000413610 527 ntBASIC15.56■□□□□ 0.08
BRCA2P51587 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
BRCA2P51587 RN7SL455P-201ENST00000580629 282 ntBASIC15.56■□□□□ 0.08
BRCA2P51587 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
BRCA2P51587 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC15.56■□□□□ 0.08
BRCA2P51587 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC15.56■□□□□ 0.08
BRCA2P51587 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC15.56■□□□□ 0.08
BRCA2P51587 AP000533.1-201ENST00000456143 1177 ntBASIC15.56■□□□□ 0.08
BRCA2P51587 TBC1D3P6-201ENST00000505954 962 ntBASIC15.56■□□□□ 0.08
BRCA2P51587 RPL10P8-201ENST00000522888 313 ntBASIC15.56■□□□□ 0.08
BRCA2P51587 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC15.56■□□□□ 0.08
BRCA2P51587 AC134878.2-201ENST00000620700 1265 ntBASIC15.56■□□□□ 0.08
BRCA2P51587 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC15.56■□□□□ 0.08
BRCA2P51587 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.56■□□□□ 0.08
BRCA2P51587 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.56■□□□□ 0.08
BRCA2P51587 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
BRCA2P51587 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.56■□□□□ 0.08
BRCA2P51587 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRCA2P51587 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
BRCA2P51587 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.56■□□□□ 0.08
BRCA2P51587 U3.41-201ENST00000408711 219 ntBASIC15.56■□□□□ 0.08
BRCA2P51587 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC15.56■□□□□ 0.08
BRCA2P51587 AC103724.2-201ENST00000520355 476 ntBASIC15.56■□□□□ 0.08
BRCA2P51587 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC15.56■□□□□ 0.08
BRCA2P51587 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.56■□□□□ 0.08
BRCA2P51587 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.56■□□□□ 0.08
BRCA2P51587 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.56■□□□□ 0.08
BRCA2P51587 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.55■□□□□ 0.08
BRCA2P51587 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.55■□□□□ 0.08
BRCA2P51587 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC15.55■□□□□ 0.08
BRCA2P51587 AC097474.1-201ENST00000506481 1371 ntBASIC15.55■□□□□ 0.08
BRCA2P51587 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.55■□□□□ 0.08
BRCA2P51587 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRCA2P51587 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC15.55■□□□□ 0.08
BRCA2P51587 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC15.55■□□□□ 0.08
BRCA2P51587 AC008021.1-201ENST00000474180 414 ntBASIC15.55■□□□□ 0.08
BRCA2P51587 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC15.55■□□□□ 0.08
BRCA2P51587 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRCA2P51587 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC15.55■□□□□ 0.08
BRCA2P51587 AC015818.3-201ENST00000583797 589 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms