Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 RNA5SP359-201ENST00000364838 113 ntBASIC18.12■□□□□ 0.49
CCT4P50991 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.12■□□□□ 0.49
CCT4P50991 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.12■□□□□ 0.49
CCT4P50991 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.12■□□□□ 0.49
CCT4P50991 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.12■□□□□ 0.49
CCT4P50991 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.12■□□□□ 0.49
CCT4P50991 AC093752.3-201ENST00000567343 901 ntBASIC18.12■□□□□ 0.49
CCT4P50991 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC18.12■□□□□ 0.49
CCT4P50991 MIR4754-201ENST00000582477 89 ntBASIC18.12■□□□□ 0.49
CCT4P50991 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.12■□□□□ 0.49
CCT4P50991 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.12■□□□□ 0.49
CCT4P50991 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 AC006453.1-201ENST00000636037 1257 ntBASIC18.12■□□□□ 0.49
CCT4P50991 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.12■□□□□ 0.49
CCT4P50991 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.12■□□□□ 0.49
CCT4P50991 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.12■□□□□ 0.49
CCT4P50991 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCT4P50991 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.12■□□□□ 0.49
CCT4P50991 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 DDC-213ENST00000617822 1809 ntTSL 3 BASIC18.12■□□□□ 0.49
CCT4P50991 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCT4P50991 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCT4P50991 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.11■□□□□ 0.49
CCT4P50991 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC18.11■□□□□ 0.49
CCT4P50991 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCT4P50991 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.11■□□□□ 0.49
CCT4P50991 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.11■□□□□ 0.49
CCT4P50991 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.11■□□□□ 0.49
CCT4P50991 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.11■□□□□ 0.49
CCT4P50991 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.11■□□□□ 0.49
CCT4P50991 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCT4P50991 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCT4P50991 RDX-218ENST00000544551 4117 ntTSL 2 BASIC18.11■□□□□ 0.49
CCT4P50991 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCT4P50991 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCT4P50991 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.1■□□□□ 0.49
CCT4P50991 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.1■□□□□ 0.49
CCT4P50991 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC18.1■□□□□ 0.49
CCT4P50991 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC18.1■□□□□ 0.49
CCT4P50991 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC18.1■□□□□ 0.49
CCT4P50991 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.1■□□□□ 0.49
CCT4P50991 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.1■□□□□ 0.49
CCT4P50991 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.1■□□□□ 0.49
CCT4P50991 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCT4P50991 AC103592.1-201ENST00000394513 664 ntBASIC18.1■□□□□ 0.49
CCT4P50991 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms