Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.54□□□□□ -0.4
CBX5P45973 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
CBX5P45973 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.54□□□□□ -0.4
CBX5P45973 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.54□□□□□ -0.4
CBX5P45973 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CBX5P45973 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.54□□□□□ -0.4
CBX5P45973 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.54□□□□□ -0.4
CBX5P45973 RPL13AP25-201ENST00000484130 612 ntBASIC12.54□□□□□ -0.4
CBX5P45973 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CBX5P45973 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.54□□□□□ -0.4
CBX5P45973 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.54□□□□□ -0.4
CBX5P45973 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.54□□□□□ -0.4
CBX5P45973 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CBX5P45973 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.54□□□□□ -0.4
CBX5P45973 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.54□□□□□ -0.4
CBX5P45973 BX539320.1-201ENST00000623759 877 ntBASIC12.54□□□□□ -0.4
CBX5P45973 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.54□□□□□ -0.4
CBX5P45973 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.54□□□□□ -0.4
CBX5P45973 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.54□□□□□ -0.4
CBX5P45973 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CBX5P45973 IYD-208ENST00000500320 2158 ntTSL 2 BASIC12.54□□□□□ -0.4
CBX5P45973 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CBX5P45973 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CBX5P45973 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.54□□□□□ -0.4
CBX5P45973 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CBX5P45973 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.54□□□□□ -0.4
CBX5P45973 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CBX5P45973 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CBX5P45973 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CBX5P45973 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CBX5P45973 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CBX5P45973 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CBX5P45973 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CBX5P45973 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CBX5P45973 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
CBX5P45973 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.53□□□□□ -0.4
CBX5P45973 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.53□□□□□ -0.4
CBX5P45973 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CBX5P45973 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CBX5P45973 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.53□□□□□ -0.4
CBX5P45973 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CBX5P45973 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 AC015688.4-201ENST00000580780 1647 ntBASIC12.53□□□□□ -0.4
CBX5P45973 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.53□□□□□ -0.4
CBX5P45973 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.53□□□□□ -0.4
CBX5P45973 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.53□□□□□ -0.4
CBX5P45973 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
CBX5P45973 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.53□□□□□ -0.4
CBX5P45973 AC044860.1-202ENST00000559481 777 ntBASIC12.53□□□□□ -0.4
CBX5P45973 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.53□□□□□ -0.4
CBX5P45973 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CBX5P45973 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC12.53□□□□□ -0.4
CBX5P45973 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CBX5P45973 AC112176.1-201ENST00000565428 3024 ntBASIC12.53□□□□□ -0.4
CBX5P45973 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms