Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC24.34■■□□□ 1.49
NCAPD3P42695 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC24.34■■□□□ 1.49
NCAPD3P42695 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NCAPD3P42695 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
NCAPD3P42695 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NCAPD3P42695 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCAPD3P42695 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCAPD3P42695 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCAPD3P42695 RBPMSLP-201ENST00000433427 502 ntBASIC24.33■■□□□ 1.49
NCAPD3P42695 RPL35P1-201ENST00000450819 370 ntBASIC24.33■■□□□ 1.49
NCAPD3P42695 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC24.33■■□□□ 1.49
NCAPD3P42695 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC24.33■■□□□ 1.49
NCAPD3P42695 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC24.33■■□□□ 1.49
NCAPD3P42695 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC24.33■■□□□ 1.49
NCAPD3P42695 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCAPD3P42695 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC24.33■■□□□ 1.49
NCAPD3P42695 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC24.33■■□□□ 1.49
NCAPD3P42695 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC24.33■■□□□ 1.49
NCAPD3P42695 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCAPD3P42695 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC24.33■■□□□ 1.49
NCAPD3P42695 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NCAPD3P42695 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
NCAPD3P42695 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC24.33■■□□□ 1.49
NCAPD3P42695 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCAPD3P42695 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCAPD3P42695 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC24.33■■□□□ 1.48
NCAPD3P42695 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
NCAPD3P42695 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
NCAPD3P42695 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
NCAPD3P42695 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC24.32■■□□□ 1.48
NCAPD3P42695 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC24.32■■□□□ 1.48
NCAPD3P42695 TPT1P11-201ENST00000458482 498 ntBASIC24.32■■□□□ 1.48
NCAPD3P42695 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 AP001102.1-201ENST00000528959 409 ntBASIC24.32■■□□□ 1.48
NCAPD3P42695 NEMF-210ENST00000556672 590 ntTSL 2 BASIC24.32■■□□□ 1.48
NCAPD3P42695 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC24.32■■□□□ 1.48
NCAPD3P42695 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC24.32■■□□□ 1.48
NCAPD3P42695 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
NCAPD3P42695 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
NCAPD3P42695 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 NME1-209ENST00000511355 1645 ntTSL 5 BASIC24.32■■□□□ 1.48
NCAPD3P42695 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
NCAPD3P42695 DOC2GP-204ENST00000639052 2548 ntBASIC24.32■■□□□ 1.48
NCAPD3P42695 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC24.32■■□□□ 1.48
NCAPD3P42695 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC24.32■■□□□ 1.48
NCAPD3P42695 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NCAPD3P42695 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NCAPD3P42695 AC013268.4-201ENST00000637413 2228 ntBASIC24.32■■□□□ 1.48
NCAPD3P42695 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC24.32■■□□□ 1.48
NCAPD3P42695 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 MARCKSL1P2-201ENST00000401037 976 ntBASIC24.32■■□□□ 1.48
NCAPD3P42695 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC24.32■■□□□ 1.48
NCAPD3P42695 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC24.32■■□□□ 1.48
NCAPD3P42695 AC007881.1-201ENST00000437460 187 ntBASIC24.32■■□□□ 1.48
NCAPD3P42695 AC069421.1-201ENST00000447462 323 ntBASIC24.32■■□□□ 1.48
NCAPD3P42695 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC24.32■■□□□ 1.48
NCAPD3P42695 YBX1P3-201ENST00000468366 909 ntBASIC24.32■■□□□ 1.48
NCAPD3P42695 JPT1-205ENST00000470924 663 ntTSL 5 BASIC24.32■■□□□ 1.48
NCAPD3P42695 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC24.32■■□□□ 1.48
NCAPD3P42695 MIR4309-201ENST00000582498 83 ntBASIC24.32■■□□□ 1.48
NCAPD3P42695 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC24.32■■□□□ 1.48
NCAPD3P42695 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NCAPD3P42695 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC24.32■■□□□ 1.48
NCAPD3P42695 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC24.32■■□□□ 1.48
NCAPD3P42695 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCAPD3P42695 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC24.32■■□□□ 1.48
NCAPD3P42695 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
NCAPD3P42695 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
NCAPD3P42695 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
NCAPD3P42695 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
NCAPD3P42695 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
NCAPD3P42695 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC24.31■■□□□ 1.48
NCAPD3P42695 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC24.31■■□□□ 1.48
NCAPD3P42695 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NCAPD3P42695 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC24.31■■□□□ 1.48
NCAPD3P42695 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NCAPD3P42695 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
NCAPD3P42695 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NCAPD3P42695 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NCAPD3P42695 MIR193A-201ENST00000384882 88 ntBASIC24.31■■□□□ 1.48
NCAPD3P42695 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
NCAPD3P42695 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC24.31■■□□□ 1.48
NCAPD3P42695 SNORA50D-201ENST00000408059 134 ntBASIC24.31■■□□□ 1.48
NCAPD3P42695 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NCAPD3P42695 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms