Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 RN7SKP214-201ENST00000364208 315 ntBASIC16.67■□□□□ 0.26
CDC27P30260 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDC27P30260 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.67■□□□□ 0.26
CDC27P30260 GPAA1P2-201ENST00000417923 928 ntBASIC16.67■□□□□ 0.26
CDC27P30260 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC27P30260 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC27P30260 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC27P30260 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC27P30260 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC27P30260 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC27P30260 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.67■□□□□ 0.26
CDC27P30260 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC27P30260 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDC27P30260 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 KRT8P21-201ENST00000430398 1491 ntBASIC16.67■□□□□ 0.26
CDC27P30260 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC27P30260 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDC27P30260 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 TSPY25P-201ENST00000429463 745 ntBASIC16.66■□□□□ 0.26
CDC27P30260 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC27P30260 EIF4HP1-201ENST00000453115 687 ntBASIC16.66■□□□□ 0.26
CDC27P30260 KRT18P15-201ENST00000458108 1291 ntBASIC16.66■□□□□ 0.26
CDC27P30260 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 AC099548.2-209ENST00000480264 625 ntBASIC16.66■□□□□ 0.26
CDC27P30260 RN7SL277P-201ENST00000481521 288 ntBASIC16.66■□□□□ 0.26
CDC27P30260 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC27P30260 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.66■□□□□ 0.26
CDC27P30260 AC138649.2-201ENST00000615886 705 ntBASIC16.66■□□□□ 0.26
CDC27P30260 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 LINC01815-202ENST00000641468 1409 ntBASIC16.66■□□□□ 0.26
CDC27P30260 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC27P30260 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 AC089987.1-201ENST00000551654 2209 ntBASIC16.66■□□□□ 0.26
CDC27P30260 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC27P30260 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDC27P30260 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDC27P30260 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC27P30260 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC27P30260 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC27P30260 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDC27P30260 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC27P30260 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC27P30260 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC27P30260 BX284668.4-201ENST00000453917 508 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms