Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC104506.1-201ENST00000609247 429 ntBASIC14.1□□□□□ -0.15
EPHA3P29320 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.1□□□□□ -0.15
EPHA3P29320 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
EPHA3P29320 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.1□□□□□ -0.15
EPHA3P29320 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
EPHA3P29320 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.1□□□□□ -0.15
EPHA3P29320 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
EPHA3P29320 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 PCDHB18P-202ENST00000526308 3197 ntBASIC14.1□□□□□ -0.15
EPHA3P29320 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EPHA3P29320 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
EPHA3P29320 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 PCDHA5-203ENST00000614258 4248 ntBASIC14.09□□□□□ -0.15
EPHA3P29320 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
EPHA3P29320 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.09□□□□□ -0.15
EPHA3P29320 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
EPHA3P29320 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 USP17L6P-201ENST00000382470 1197 ntBASIC14.09□□□□□ -0.15
EPHA3P29320 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.09□□□□□ -0.15
EPHA3P29320 BASP1P1-201ENST00000430708 665 ntBASIC14.09□□□□□ -0.15
EPHA3P29320 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.09□□□□□ -0.15
EPHA3P29320 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 AC093214.1-201ENST00000511688 1107 ntBASIC14.09□□□□□ -0.15
EPHA3P29320 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.09□□□□□ -0.15
EPHA3P29320 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.09□□□□□ -0.15
EPHA3P29320 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.09□□□□□ -0.15
EPHA3P29320 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.09□□□□□ -0.15
EPHA3P29320 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.09□□□□□ -0.15
EPHA3P29320 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.09□□□□□ -0.15
EPHA3P29320 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
EPHA3P29320 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
EPHA3P29320 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.09□□□□□ -0.15
EPHA3P29320 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPHA3P29320 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
EPHA3P29320 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
EPHA3P29320 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
EPHA3P29320 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
EPHA3P29320 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
EPHA3P29320 AC073869.1-201ENST00000415574 2762 ntBASIC14.08□□□□□ -0.16
EPHA3P29320 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.08□□□□□ -0.16
EPHA3P29320 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.08□□□□□ -0.16
EPHA3P29320 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.08□□□□□ -0.16
EPHA3P29320 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.08□□□□□ -0.16
EPHA3P29320 MSTO2P-201ENST00000314835 1709 ntBASIC14.08□□□□□ -0.16
EPHA3P29320 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.08□□□□□ -0.16
EPHA3P29320 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms