Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.28■□□□□ 0.52
RXRBP28702 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RXRBP28702 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC18.28■□□□□ 0.52
RXRBP28702 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RXRBP28702 SNU13-204ENST00000402458 462 ntTSL 3 BASIC18.28■□□□□ 0.52
RXRBP28702 AC010997.1-201ENST00000447646 350 ntBASIC18.28■□□□□ 0.52
RXRBP28702 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC18.28■□□□□ 0.52
RXRBP28702 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RXRBP28702 AC105424.1-201ENST00000514583 209 ntBASIC18.28■□□□□ 0.52
RXRBP28702 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 HAX1-211ENST00000532105 771 ntTSL 3 BASIC18.28■□□□□ 0.52
RXRBP28702 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
RXRBP28702 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 AC090616.6-202ENST00000583601 1088 ntBASIC18.28■□□□□ 0.52
RXRBP28702 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC18.28■□□□□ 0.52
RXRBP28702 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC18.28■□□□□ 0.52
RXRBP28702 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 PTN-202ENST00000393083 1599 ntTSL 5 BASIC18.28■□□□□ 0.52
RXRBP28702 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.28■□□□□ 0.52
RXRBP28702 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.28■□□□□ 0.52
RXRBP28702 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.28■□□□□ 0.52
RXRBP28702 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.28■□□□□ 0.52
RXRBP28702 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RXRBP28702 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 AC087481.3-201ENST00000602886 1894 ntBASIC18.27■□□□□ 0.52
RXRBP28702 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RXRBP28702 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 OR7E122P-201ENST00000383606 1017 ntBASIC18.27■□□□□ 0.52
RXRBP28702 SRSF9P1-201ENST00000399149 530 ntBASIC18.27■□□□□ 0.52
RXRBP28702 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC18.27■□□□□ 0.52
RXRBP28702 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC18.27■□□□□ 0.52
RXRBP28702 AC041040.1-201ENST00000425197 460 ntBASIC18.27■□□□□ 0.52
RXRBP28702 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC18.27■□□□□ 0.52
RXRBP28702 NDUFB2P1-201ENST00000506966 295 ntBASIC18.27■□□□□ 0.52
RXRBP28702 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC18.27■□□□□ 0.52
RXRBP28702 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC18.27■□□□□ 0.52
RXRBP28702 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
RXRBP28702 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC18.27■□□□□ 0.52
RXRBP28702 AL356740.1-201ENST00000602192 1297 ntBASIC18.27■□□□□ 0.52
RXRBP28702 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC18.27■□□□□ 0.52
RXRBP28702 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RXRBP28702 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RXRBP28702 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC18.27■□□□□ 0.52
RXRBP28702 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC18.27■□□□□ 0.52
RXRBP28702 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC18.27■□□□□ 0.52
RXRBP28702 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RXRBP28702 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
RXRBP28702 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RXRBP28702 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RXRBP28702 RN7SL832P-201ENST00000607781 1756 ntBASIC18.27■□□□□ 0.51
RXRBP28702 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RXRBP28702 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RXRBP28702 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RXRBP28702 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RXRBP28702 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.26■□□□□ 0.51
RXRBP28702 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC18.26■□□□□ 0.51
RXRBP28702 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.26■□□□□ 0.51
RXRBP28702 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.26■□□□□ 0.51
RXRBP28702 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.26■□□□□ 0.51
RXRBP28702 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RXRBP28702 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RXRBP28702 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RXRBP28702 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC18.26■□□□□ 0.51
RXRBP28702 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms