Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNMTL1P1-201ENST00000454103 560 ntBASIC12.43□□□□□ -0.42
TNFSF4P23510 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.43□□□□□ -0.42
TNFSF4P23510 SERPINA13P-202ENST00000478994 924 ntBASIC12.43□□□□□ -0.42
TNFSF4P23510 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.43□□□□□ -0.42
TNFSF4P23510 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.43□□□□□ -0.42
TNFSF4P23510 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.43□□□□□ -0.42
TNFSF4P23510 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.43□□□□□ -0.42
TNFSF4P23510 AC005586.2-201ENST00000563946 837 ntBASIC12.43□□□□□ -0.42
TNFSF4P23510 AC005730.2-201ENST00000564549 1184 ntBASIC12.43□□□□□ -0.42
TNFSF4P23510 MIR6869-201ENST00000619434 62 ntBASIC12.43□□□□□ -0.42
TNFSF4P23510 AC004923.1-202ENST00000642106 209 ntBASIC12.43□□□□□ -0.42
TNFSF4P23510 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.43□□□□□ -0.42
TNFSF4P23510 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.43□□□□□ -0.42
TNFSF4P23510 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TNFSF4P23510 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
TNFSF4P23510 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.42□□□□□ -0.42
TNFSF4P23510 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.42□□□□□ -0.42
TNFSF4P23510 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TNFSF4P23510 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TNFSF4P23510 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.42□□□□□ -0.42
TNFSF4P23510 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.42□□□□□ -0.42
TNFSF4P23510 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.42□□□□□ -0.42
TNFSF4P23510 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.42□□□□□ -0.42
TNFSF4P23510 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.42□□□□□ -0.42
TNFSF4P23510 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.42□□□□□ -0.42
TNFSF4P23510 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 SORD2P-201ENST00000558556 1069 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.42□□□□□ -0.42
TNFSF4P23510 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.42□□□□□ -0.42
TNFSF4P23510 MIR4538-201ENST00000581377 78 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 AC005962.1-201ENST00000584100 773 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 AC020914.3-201ENST00000594712 304 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 BNIP3P13-201ENST00000599968 566 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 AP000346.4-201ENST00000614827 381 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 AC133540.1-201ENST00000620845 1019 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.42□□□□□ -0.42
TNFSF4P23510 AC244452.3-201ENST00000636814 210 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TNFSF4P23510 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
TNFSF4P23510 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 AC232323.1-201ENST00000540724 2099 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TNFSF4P23510 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 AC004899.1-201ENST00000424687 1714 ntBASIC12.42□□□□□ -0.42
TNFSF4P23510 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TNFSF4P23510 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
TNFSF4P23510 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms