Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC23.69■■□□□ 1.38
CFTRP13569 AL954722.1-201ENST00000431238 259 ntBASIC23.69■■□□□ 1.38
CFTRP13569 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC23.69■■□□□ 1.38
CFTRP13569 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC23.69■■□□□ 1.38
CFTRP13569 CDC37P2-201ENST00000562287 1029 ntBASIC23.69■■□□□ 1.38
CFTRP13569 ABCD1P3-201ENST00000562927 605 ntBASIC23.69■■□□□ 1.38
CFTRP13569 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC23.69■■□□□ 1.38
CFTRP13569 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 TCAF2P1-201ENST00000291129 2421 ntBASIC23.69■■□□□ 1.38
CFTRP13569 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
CFTRP13569 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CFTRP13569 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC23.69■■□□□ 1.38
CFTRP13569 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC23.69■■□□□ 1.38
CFTRP13569 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
CFTRP13569 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC23.69■■□□□ 1.38
CFTRP13569 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC23.69■■□□□ 1.38
CFTRP13569 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC23.69■■□□□ 1.38
CFTRP13569 RCC2P1-201ENST00000452257 1476 ntBASIC23.69■■□□□ 1.38
CFTRP13569 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CFTRP13569 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CFTRP13569 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFTRP13569 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CFTRP13569 OR7E12P-201ENST00000344740 973 ntBASIC23.68■■□□□ 1.38
CFTRP13569 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC23.68■■□□□ 1.38
CFTRP13569 RN7SL794P-201ENST00000469816 280 ntBASIC23.68■■□□□ 1.38
CFTRP13569 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CFTRP13569 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC23.68■■□□□ 1.38
CFTRP13569 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC23.68■■□□□ 1.38
CFTRP13569 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC23.68■■□□□ 1.38
CFTRP13569 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC23.68■■□□□ 1.38
CFTRP13569 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CFTRP13569 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CFTRP13569 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CFTRP13569 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 HMGA1P2-201ENST00000430198 324 ntBASIC23.68■■□□□ 1.38
CFTRP13569 AC005077.3-201ENST00000449614 213 ntBASIC23.68■■□□□ 1.38
CFTRP13569 SNORA47-201ENST00000458862 138 ntBASIC23.68■■□□□ 1.38
CFTRP13569 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC23.68■■□□□ 1.38
CFTRP13569 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
CFTRP13569 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC23.68■■□□□ 1.38
CFTRP13569 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC23.68■■□□□ 1.38
CFTRP13569 AL137028.2-201ENST00000614601 256 ntBASIC23.68■■□□□ 1.38
CFTRP13569 OR3A1-202ENST00000615105 966 ntBASIC23.68■■□□□ 1.38
CFTRP13569 SNORA50D-202ENST00000627561 132 ntBASIC23.68■■□□□ 1.38
CFTRP13569 COG6-212ENST00000630730 186 ntTSL 5 BASIC23.68■■□□□ 1.38
CFTRP13569 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC23.68■■□□□ 1.38
CFTRP13569 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFTRP13569 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFTRP13569 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFTRP13569 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC23.67■■□□□ 1.38
CFTRP13569 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFTRP13569 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFTRP13569 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFTRP13569 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFTRP13569 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC23.67■■□□□ 1.38
CFTRP13569 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CFTRP13569 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFTRP13569 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC23.67■■□□□ 1.38
CFTRP13569 AL591499.1-201ENST00000307155 1153 ntBASIC23.67■■□□□ 1.38
CFTRP13569 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFTRP13569 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC23.67■■□□□ 1.38
CFTRP13569 AF186996.6-201ENST00000485294 149 ntBASIC23.67■■□□□ 1.38
CFTRP13569 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC23.67■■□□□ 1.38
CFTRP13569 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC23.67■■□□□ 1.38
CFTRP13569 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC23.67■■□□□ 1.38
CFTRP13569 NAT9-219ENST00000582524 573 ntTSL 4 BASIC23.67■■□□□ 1.38
CFTRP13569 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC23.67■■□□□ 1.38
CFTRP13569 Z82244.2-201ENST00000632196 448 ntBASIC23.67■■□□□ 1.38
CFTRP13569 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFTRP13569 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC23.67■■□□□ 1.38
CFTRP13569 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFTRP13569 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CFTRP13569 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFTRP13569 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFTRP13569 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFTRP13569 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFTRP13569 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFTRP13569 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFTRP13569 POP5-201ENST00000341039 913 ntTSL 2 BASIC23.66■■□□□ 1.38
CFTRP13569 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC23.66■■□□□ 1.38
CFTRP13569 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC23.66■■□□□ 1.38
CFTRP13569 RBMX2P5-201ENST00000424312 969 ntBASIC23.66■■□□□ 1.38
CFTRP13569 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms