Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNB1P11230 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CHRNB1P11230 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CHRNB1P11230 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNB1P11230 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRNB1P11230 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.6□□□□□ -0.07
CHRNB1P11230 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRNB1P11230 SIGLEC22P-201ENST00000599104 714 ntBASIC14.6□□□□□ -0.07
CHRNB1P11230 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNB1P11230 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNB1P11230 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRNB1P11230 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CHRNB1P11230 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNB1P11230 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNB1P11230 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNB1P11230 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNB1P11230 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNB1P11230 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNB1P11230 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CHRNB1P11230 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.59□□□□□ -0.07
CHRNB1P11230 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.59□□□□□ -0.07
CHRNB1P11230 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 AC090386.2-201ENST00000623010 1039 ntBASIC14.59□□□□□ -0.07
CHRNB1P11230 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNB1P11230 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CHRNB1P11230 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CHRNB1P11230 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNB1P11230 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNB1P11230 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CHRNB1P11230 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNB1P11230 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNB1P11230 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.58□□□□□ -0.07
CHRNB1P11230 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHRNB1P11230 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHRNB1P11230 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHRNB1P11230 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHRNB1P11230 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CHRNB1P11230 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.58□□□□□ -0.07
CHRNB1P11230 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.58□□□□□ -0.07
CHRNB1P11230 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHRNB1P11230 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHRNB1P11230 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CHRNB1P11230 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms