Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.85■□□□□ 0.13
CLTAP09496 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLTAP09496 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CLTAP09496 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.85■□□□□ 0.13
CLTAP09496 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLTAP09496 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.84■□□□□ 0.13
CLTAP09496 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.84■□□□□ 0.13
CLTAP09496 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.84■□□□□ 0.13
CLTAP09496 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.84■□□□□ 0.13
CLTAP09496 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.84■□□□□ 0.13
CLTAP09496 AC125604.1-201ENST00000496255 707 ntBASIC15.84■□□□□ 0.13
CLTAP09496 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.84■□□□□ 0.13
CLTAP09496 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.84■□□□□ 0.13
CLTAP09496 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.84■□□□□ 0.13
CLTAP09496 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.84■□□□□ 0.13
CLTAP09496 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.84■□□□□ 0.13
CLTAP09496 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.84■□□□□ 0.13
CLTAP09496 AL139099.5-201ENST00000635274 300 ntBASIC15.84■□□□□ 0.13
CLTAP09496 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLTAP09496 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLTAP09496 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.84■□□□□ 0.13
CLTAP09496 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CLTAP09496 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLTAP09496 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLTAP09496 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLTAP09496 AL359183.1-201ENST00000623796 2132 ntBASIC15.83■□□□□ 0.13
CLTAP09496 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
CLTAP09496 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLTAP09496 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLTAP09496 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLTAP09496 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLTAP09496 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.83■□□□□ 0.13
CLTAP09496 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLTAP09496 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CLTAP09496 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLTAP09496 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
CLTAP09496 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CLTAP09496 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.83■□□□□ 0.12
CLTAP09496 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.83■□□□□ 0.12
CLTAP09496 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.83■□□□□ 0.12
CLTAP09496 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CLTAP09496 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.83■□□□□ 0.12
CLTAP09496 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.83■□□□□ 0.12
CLTAP09496 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.83■□□□□ 0.12
CLTAP09496 AC003686.1-201ENST00000550956 1034 ntBASIC15.83■□□□□ 0.12
CLTAP09496 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.83■□□□□ 0.12
CLTAP09496 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.83■□□□□ 0.12
CLTAP09496 AL805961.1-203ENST00000641078 1258 ntBASIC15.83■□□□□ 0.12
CLTAP09496 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CLTAP09496 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLTAP09496 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CLTAP09496 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms