Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
TPM1P09493 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16■□□□□ 0.15
TPM1P09493 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 HLA-DRB6-201ENST00000411500 1235 ntBASIC16■□□□□ 0.15
TPM1P09493 AC004890.2-204ENST00000481968 304 ntBASIC16■□□□□ 0.15
TPM1P09493 AC093004.1-201ENST00000508850 424 ntBASIC16■□□□□ 0.15
TPM1P09493 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16■□□□□ 0.15
TPM1P09493 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16■□□□□ 0.15
TPM1P09493 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TPM1P09493 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16■□□□□ 0.15
TPM1P09493 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 AC008761.3-201ENST00000624803 892 ntBASIC16■□□□□ 0.15
TPM1P09493 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16■□□□□ 0.15
TPM1P09493 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16■□□□□ 0.15
TPM1P09493 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16■□□□□ 0.15
TPM1P09493 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TPM1P09493 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16■□□□□ 0.15
TPM1P09493 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16■□□□□ 0.15
TPM1P09493 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM1P09493 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TPM1P09493 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TPM1P09493 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM1P09493 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
TPM1P09493 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.99■□□□□ 0.15
TPM1P09493 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM1P09493 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TPM1P09493 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM1P09493 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM1P09493 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
TPM1P09493 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.99■□□□□ 0.15
TPM1P09493 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.99■□□□□ 0.15
TPM1P09493 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.99■□□□□ 0.15
TPM1P09493 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.99■□□□□ 0.15
TPM1P09493 DUX4L27-201ENST00000554796 1261 ntBASIC15.99■□□□□ 0.15
TPM1P09493 AC133539.2-201ENST00000604757 467 ntBASIC15.99■□□□□ 0.15
TPM1P09493 AC099568.2-201ENST00000609194 695 ntBASIC15.99■□□□□ 0.15
TPM1P09493 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 AP001002.3-201ENST00000623482 206 ntBASIC15.99■□□□□ 0.15
TPM1P09493 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM1P09493 AGAP10P-201ENST00000454844 2418 ntBASIC15.99■□□□□ 0.15
TPM1P09493 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM1P09493 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TPM1P09493 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM1P09493 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TPM1P09493 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM1P09493 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.99■□□□□ 0.15
TPM1P09493 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM1P09493 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TPM1P09493 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TPM1P09493 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TPM1P09493 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TPM1P09493 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM1P09493 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TPM1P09493 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.98■□□□□ 0.15
TPM1P09493 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms