Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RBP1P09455 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.27□□□□□ -0.13
RBP1P09455 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RBP1P09455 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RBP1P09455 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RBP1P09455 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RBP1P09455 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RBP1P09455 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.26□□□□□ -0.13
RBP1P09455 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RBP1P09455 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RBP1P09455 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
RBP1P09455 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.26□□□□□ -0.13
RBP1P09455 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.26□□□□□ -0.13
RBP1P09455 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.26□□□□□ -0.13
RBP1P09455 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RBP1P09455 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.26□□□□□ -0.13
RBP1P09455 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.26□□□□□ -0.13
RBP1P09455 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 CNN2P8-201ENST00000421872 913 ntBASIC14.26□□□□□ -0.13
RBP1P09455 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.26□□□□□ -0.13
RBP1P09455 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.26□□□□□ -0.13
RBP1P09455 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.26□□□□□ -0.13
RBP1P09455 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RBP1P09455 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.26□□□□□ -0.13
RBP1P09455 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RBP1P09455 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RBP1P09455 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 TCAF1P1-201ENST00000414990 2232 ntBASIC14.26□□□□□ -0.13
RBP1P09455 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RBP1P09455 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBP1P09455 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RBP1P09455 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RBP1P09455 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.25□□□□□ -0.13
RBP1P09455 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.25□□□□□ -0.13
RBP1P09455 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.25□□□□□ -0.13
RBP1P09455 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.25□□□□□ -0.13
RBP1P09455 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 AC112492.5-201ENST00000421897 457 ntBASIC14.25□□□□□ -0.13
RBP1P09455 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.25□□□□□ -0.13
RBP1P09455 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RBP1P09455 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.25□□□□□ -0.13
RBP1P09455 AL355994.2-201ENST00000447882 704 ntBASIC14.25□□□□□ -0.13
RBP1P09455 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RBP1P09455 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
RBP1P09455 FTH1P14-201ENST00000482930 551 ntBASIC14.25□□□□□ -0.13
RBP1P09455 USP32P1-208ENST00000506594 1164 ntBASIC14.25□□□□□ -0.13
RBP1P09455 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RBP1P09455 AC078819.1-201ENST00000547454 765 ntBASIC14.25□□□□□ -0.13
RBP1P09455 AC012085.1-201ENST00000548270 765 ntBASIC14.25□□□□□ -0.13
RBP1P09455 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.25□□□□□ -0.13
RBP1P09455 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
RBP1P09455 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.25□□□□□ -0.13
RBP1P09455 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.25□□□□□ -0.13
RBP1P09455 AL136301.1-201ENST00000615830 422 ntBASIC14.25□□□□□ -0.13
RBP1P09455 AC138951.2-201ENST00000623455 1161 ntBASIC14.25□□□□□ -0.13
RBP1P09455 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.25□□□□□ -0.13
RBP1P09455 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RBP1P09455 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.25□□□□□ -0.13
RBP1P09455 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms