Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.27■□□□□ 0.2
TPM3P06753 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.27■□□□□ 0.2
TPM3P06753 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.27■□□□□ 0.2
TPM3P06753 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.27■□□□□ 0.2
TPM3P06753 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TPM3P06753 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 AC009477.1-201ENST00000452936 217 ntBASIC16.27■□□□□ 0.2
TPM3P06753 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.27■□□□□ 0.2
TPM3P06753 AC097493.3-201ENST00000509725 367 ntBASIC16.27■□□□□ 0.2
TPM3P06753 AC135586.1-201ENST00000539323 574 ntBASIC16.27■□□□□ 0.2
TPM3P06753 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.27■□□□□ 0.2
TPM3P06753 AC004449.1-201ENST00000564240 433 ntBASIC16.27■□□□□ 0.2
TPM3P06753 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.27■□□□□ 0.2
TPM3P06753 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16.27■□□□□ 0.2
TPM3P06753 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC16.27■□□□□ 0.19
TPM3P06753 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TPM3P06753 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC16.27■□□□□ 0.19
TPM3P06753 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TPM3P06753 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TPM3P06753 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TPM3P06753 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TPM3P06753 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TPM3P06753 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.27■□□□□ 0.19
TPM3P06753 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TPM3P06753 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TPM3P06753 INTS4P2-202ENST00000614726 2019 ntBASIC16.26■□□□□ 0.19
TPM3P06753 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TPM3P06753 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TPM3P06753 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TPM3P06753 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 MEP1AP4-201ENST00000423244 1087 ntBASIC16.26■□□□□ 0.19
TPM3P06753 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.26■□□□□ 0.19
TPM3P06753 AL589987.1-201ENST00000453380 819 ntBASIC16.26■□□□□ 0.19
TPM3P06753 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM3P06753 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
TPM3P06753 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.26■□□□□ 0.19
TPM3P06753 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.26■□□□□ 0.19
TPM3P06753 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.26■□□□□ 0.19
TPM3P06753 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.26■□□□□ 0.19
TPM3P06753 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM3P06753 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM3P06753 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 AL355102.3-201ENST00000554299 1678 ntBASIC16.26■□□□□ 0.19
TPM3P06753 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM3P06753 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TPM3P06753 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM3P06753 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM3P06753 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TPM3P06753 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM3P06753 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM3P06753 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM3P06753 RNU1-114P-201ENST00000365297 166 ntBASIC16.25■□□□□ 0.19
TPM3P06753 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms