Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AL132994.2-201ENST00000603120 687 ntBASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AL157813.1-201ENST00000612996 587 ntBASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 AC006033.1-201ENST00000440505 426 ntBASIC14.6□□□□□ -0.07
HLA-DQB2P05538 MARK2P5-201ENST00000507649 634 ntBASIC14.6□□□□□ -0.07
HLA-DQB2P05538 AC140658.4-201ENST00000561990 352 ntBASIC14.6□□□□□ -0.07
HLA-DQB2P05538 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 AL022328.3-201ENST00000607943 679 ntBASIC14.6□□□□□ -0.07
HLA-DQB2P05538 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 BAP1-211ENST00000615113 489 ntBASIC14.6□□□□□ -0.07
HLA-DQB2P05538 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQB2P05538 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 AL359881.3-201ENST00000602640 1721 ntBASIC14.59□□□□□ -0.07
HLA-DQB2P05538 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 RCC2P8-201ENST00000502779 1035 ntBASIC14.59□□□□□ -0.07
HLA-DQB2P05538 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms