Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
P04436 AC015909.3-201ENST00000572855 1794 ntBASIC13.19□□□□□ -0.3
P04436 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04436 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04436 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04436 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.19□□□□□ -0.3
P04436 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
P04436 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04436 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.19□□□□□ -0.3
P04436 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04436 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.19□□□□□ -0.3
P04436 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
P04436 AL390755.1-201ENST00000623716 2027 ntBASIC13.18□□□□□ -0.3
P04436 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.18□□□□□ -0.3
P04436 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
P04436 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
P04436 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.18□□□□□ -0.3
P04436 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.18□□□□□ -0.3
P04436 DUX4L50-201ENST00000455245 715 ntBASIC13.18□□□□□ -0.3
P04436 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.18□□□□□ -0.3
P04436 AC116345.2-201ENST00000512837 523 ntBASIC13.18□□□□□ -0.3
P04436 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.18□□□□□ -0.3
P04436 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 AC105129.2-201ENST00000559536 390 ntBASIC13.18□□□□□ -0.3
P04436 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.18□□□□□ -0.3
P04436 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.18□□□□□ -0.3
P04436 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 AL353726.2-201ENST00000623259 884 ntBASIC13.18□□□□□ -0.3
P04436 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 AP002353.1-201ENST00000528257 1599 ntBASIC13.18□□□□□ -0.3
P04436 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
P04436 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.18□□□□□ -0.3
P04436 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.18□□□□□ -0.3
P04436 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
P04436 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.18□□□□□ -0.3
P04436 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.18□□□□□ -0.3
P04436 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.18□□□□□ -0.3
P04436 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04436 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
P04436 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
P04436 RN7SL832P-201ENST00000607781 1756 ntBASIC13.17□□□□□ -0.3
P04436 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.17□□□□□ -0.3
P04436 KRT18P9-201ENST00000604826 1300 ntBASIC13.17□□□□□ -0.3
P04436 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.17□□□□□ -0.3
P04436 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P04436 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 TBC1D3J-201ENST00000620719 1426 ntBASIC13.17□□□□□ -0.3
P04436 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
P04436 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P04436 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
P04436 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04436 AC026320.2-201ENST00000434379 478 ntBASIC13.17□□□□□ -0.3
P04436 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.17□□□□□ -0.3
P04436 IGLV3-15-201ENST00000518356 244 ntBASIC13.17□□□□□ -0.3
P04436 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.17□□□□□ -0.3
P04436 AC242376.1-201ENST00000559033 726 ntBASIC13.17□□□□□ -0.3
P04436 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.17□□□□□ -0.3
P04436 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.17□□□□□ -0.3
P04436 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
P04436 MIR4754-201ENST00000582477 89 ntBASIC13.17□□□□□ -0.3
P04436 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.17□□□□□ -0.3
P04436 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.17□□□□□ -0.3
P04436 AL109837.1-201ENST00000603272 613 ntBASIC13.17□□□□□ -0.3
P04436 MIR193BHG-211ENST00000641433 5365 ntBASIC13.17□□□□□ -0.3
P04436 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.17□□□□□ -0.3
P04436 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.17□□□□□ -0.3
P04436 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P04436 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.17□□□□□ -0.3
P04436 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms