Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FUK-207ENST00000571514 3054 ntTSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 AC008894.3-201ENST00000624324 3103 ntBASIC8.61□□□□□ -1.03
APOBP04114 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
APOBP04114 RN7SL87P-201ENST00000497657 288 ntBASIC8.61□□□□□ -1.03
APOBP04114 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 AC104759.1-201ENST00000559109 939 ntBASIC8.61□□□□□ -1.03
APOBP04114 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 MIR8071-1-201ENST00000616769 65 ntBASIC8.61□□□□□ -1.03
APOBP04114 MIR8071-2-201ENST00000616772 65 ntBASIC8.61□□□□□ -1.03
APOBP04114 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC8.61□□□□□ -1.03
APOBP04114 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 AC011477.7-201ENST00000617163 1440 ntBASIC8.61□□□□□ -1.03
APOBP04114 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 AP001267.2-201ENST00000532619 2086 ntBASIC8.6□□□□□ -1.03
APOBP04114 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
APOBP04114 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 DUX4L31-201ENST00000446466 1136 ntBASIC8.6□□□□□ -1.03
APOBP04114 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
APOBP04114 AC093700.1-201ENST00000503348 717 ntBASIC8.6□□□□□ -1.03
APOBP04114 PHBP18-201ENST00000546648 813 ntBASIC8.6□□□□□ -1.03
APOBP04114 HNRNPA1P11-201ENST00000580106 956 ntBASIC8.6□□□□□ -1.03
APOBP04114 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC8.6□□□□□ -1.03
APOBP04114 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC8.6□□□□□ -1.03
APOBP04114 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
APOBP04114 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
APOBP04114 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC8.6□□□□□ -1.03
APOBP04114 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC8.6□□□□□ -1.03
APOBP04114 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC8.6□□□□□ -1.03
APOBP04114 AC105443.1-201ENST00000433754 712 ntBASIC8.6□□□□□ -1.03
APOBP04114 KRT18P15-201ENST00000458108 1291 ntBASIC8.6□□□□□ -1.03
APOBP04114 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
APOBP04114 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC8.6□□□□□ -1.03
APOBP04114 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC8.6□□□□□ -1.03
APOBP04114 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
APOBP04114 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 SNORA30.1-201ENST00000363193 129 ntBASIC8.6□□□□□ -1.03
APOBP04114 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC8.6□□□□□ -1.03
APOBP04114 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC8.6□□□□□ -1.03
APOBP04114 AC104117.4-201ENST00000521486 847 ntBASIC8.6□□□□□ -1.03
APOBP04114 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC8.6□□□□□ -1.03
APOBP04114 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC8.6□□□□□ -1.03
APOBP04114 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
APOBP04114 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 SOD1-202ENST00000389995 865 ntTSL 3 BASIC8.59□□□□□ -1.03
APOBP04114 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 RPL3P9-201ENST00000463217 1183 ntBASIC8.59□□□□□ -1.03
APOBP04114 RPSAP70-201ENST00000504462 864 ntBASIC8.59□□□□□ -1.03
APOBP04114 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC8.59□□□□□ -1.03
APOBP04114 PAUPAR-201ENST00000630360 2965 ntBASIC8.59□□□□□ -1.03
APOBP04114 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms