Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.57□□□□□ -0.24
TRIM3O75382 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRIM3O75382 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 FAM8A2P-201ENST00000528813 1142 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 AC131206.1-201ENST00000538078 1211 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TRIM3O75382 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 MIR4525-201ENST00000580000 75 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 AC104982.3-201ENST00000581995 514 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 BX088702.1-201ENST00000610784 235 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 AC131212.3-201ENST00000624087 4219 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.57□□□□□ -0.24
TRIM3O75382 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.57□□□□□ -0.24
TRIM3O75382 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 MTHFR-210ENST00000641407 2387 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM3O75382 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.56□□□□□ -0.24
TRIM3O75382 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM3O75382 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 CES1P1-201ENST00000421606 1704 ntBASIC13.56□□□□□ -0.24
TRIM3O75382 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM3O75382 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRIM3O75382 AL031595.1-201ENST00000623969 4709 ntBASIC13.56□□□□□ -0.24
TRIM3O75382 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRIM3O75382 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRIM3O75382 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRIM3O75382 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRIM3O75382 AC010141.1-201ENST00000411585 623 ntBASIC13.56□□□□□ -0.24
TRIM3O75382 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 AL354877.1-201ENST00000424412 413 ntBASIC13.56□□□□□ -0.24
TRIM3O75382 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.56□□□□□ -0.24
TRIM3O75382 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.56□□□□□ -0.24
TRIM3O75382 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 GCOM2-201ENST00000509133 1104 ntBASIC13.56□□□□□ -0.24
TRIM3O75382 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRIM3O75382 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
TRIM3O75382 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.56□□□□□ -0.24
TRIM3O75382 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.56□□□□□ -0.24
TRIM3O75382 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
TRIM3O75382 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.56□□□□□ -0.24
TRIM3O75382 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.56□□□□□ -0.24
TRIM3O75382 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.56□□□□□ -0.24
TRIM3O75382 AL136301.1-201ENST00000615830 422 ntBASIC13.56□□□□□ -0.24
TRIM3O75382 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.56□□□□□ -0.24
TRIM3O75382 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM3O75382 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.56□□□□□ -0.24
TRIM3O75382 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRIM3O75382 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM3O75382 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM3O75382 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms