Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 AC005089.1-201ENST00000619486 2241 ntBASIC12.93□□□□□ -0.34
ZIC3O60481 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 KRT17P5-201ENST00000332088 839 ntBASIC12.93□□□□□ -0.34
ZIC3O60481 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.93□□□□□ -0.34
ZIC3O60481 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
ZIC3O60481 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 OR8T1P-201ENST00000421347 918 ntBASIC12.93□□□□□ -0.34
ZIC3O60481 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 RPSAP15-201ENST00000448168 861 ntBASIC12.93□□□□□ -0.34
ZIC3O60481 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 FGFR3P5-201ENST00000564496 886 ntBASIC12.93□□□□□ -0.34
ZIC3O60481 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.93□□□□□ -0.34
ZIC3O60481 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
ZIC3O60481 AL009178.2-201ENST00000597278 2719 ntBASIC12.93□□□□□ -0.34
ZIC3O60481 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ZIC3O60481 FAM90A2P-201ENST00000511144 1395 ntBASIC12.93□□□□□ -0.34
ZIC3O60481 FAM90A25P-201ENST00000528404 1395 ntBASIC12.93□□□□□ -0.34
ZIC3O60481 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.93□□□□□ -0.34
ZIC3O60481 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZIC3O60481 AC026748.1-201ENST00000624349 3251 ntBASIC12.93□□□□□ -0.34
ZIC3O60481 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ZIC3O60481 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.92□□□□□ -0.34
ZIC3O60481 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ZIC3O60481 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.92□□□□□ -0.34
ZIC3O60481 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 OR2K2-202ENST00000374428 1038 ntBASIC12.92□□□□□ -0.34
ZIC3O60481 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.92□□□□□ -0.34
ZIC3O60481 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 AC134698.3-201ENST00000523880 214 ntBASIC12.92□□□□□ -0.34
ZIC3O60481 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.92□□□□□ -0.34
ZIC3O60481 AC105129.2-201ENST00000559536 390 ntBASIC12.92□□□□□ -0.34
ZIC3O60481 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
ZIC3O60481 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.92□□□□□ -0.34
ZIC3O60481 AC012044.1-201ENST00000603431 297 ntBASIC12.92□□□□□ -0.34
ZIC3O60481 AC106872.11-201ENST00000605838 421 ntBASIC12.92□□□□□ -0.34
ZIC3O60481 AC006453.1-201ENST00000636037 1257 ntBASIC12.92□□□□□ -0.34
ZIC3O60481 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms