Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD2O14647 AL591499.1-201ENST00000307155 1153 ntBASIC19.23■□□□□ 0.67
CHD2O14647 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD2O14647 RN7SL838P-201ENST00000481676 295 ntBASIC19.23■□□□□ 0.67
CHD2O14647 MYL6-215ENST00000549566 685 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 HCG18-241ENST00000602290 821 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 AC022001.3-201ENST00000606330 596 ntBASIC19.23■□□□□ 0.67
CHD2O14647 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHD2O14647 COG6-212ENST00000630730 186 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD2O14647 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHD2O14647 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD2O14647 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CHD2O14647 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD2O14647 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD2O14647 BX088651.3-201ENST00000418155 352 ntBASIC19.23■□□□□ 0.67
CHD2O14647 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 GYG1-209ENST00000483267 801 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC19.23■□□□□ 0.67
CHD2O14647 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC19.23■□□□□ 0.67
CHD2O14647 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC19.23■□□□□ 0.67
CHD2O14647 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC19.23■□□□□ 0.67
CHD2O14647 AC137723.2-201ENST00000623540 398 ntBASIC19.23■□□□□ 0.67
CHD2O14647 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD2O14647 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD2O14647 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD2O14647 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CHD2O14647 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHD2O14647 RPL4P6-201ENST00000438116 1304 ntBASIC19.22■□□□□ 0.67
CHD2O14647 AC022532.1-201ENST00000624563 1728 ntBASIC19.22■□□□□ 0.67
CHD2O14647 RBMXP1-201ENST00000408004 1191 ntBASIC19.22■□□□□ 0.67
CHD2O14647 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC19.22■□□□□ 0.67
CHD2O14647 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC19.22■□□□□ 0.67
CHD2O14647 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC19.22■□□□□ 0.67
CHD2O14647 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHD2O14647 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CHD2O14647 AC007279.1-201ENST00000448547 837 ntBASIC19.22■□□□□ 0.67
CHD2O14647 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHD2O14647 ALDOAP1-201ENST00000491506 1078 ntBASIC19.22■□□□□ 0.67
CHD2O14647 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC19.22■□□□□ 0.67
CHD2O14647 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD2O14647 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 AL137077.2-201ENST00000635124 1608 ntBASIC19.22■□□□□ 0.67
CHD2O14647 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CHD2O14647 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD2O14647 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.22■□□□□ 0.67
CHD2O14647 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD2O14647 SFPQP1-201ENST00000446621 1786 ntBASIC19.22■□□□□ 0.67
CHD2O14647 AC104640.1-201ENST00000562617 2109 ntBASIC19.22■□□□□ 0.67
CHD2O14647 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 AC008894.3-201ENST00000624324 3103 ntBASIC19.21■□□□□ 0.67
CHD2O14647 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD2O14647 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHD2O14647 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD2O14647 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD2O14647 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CHD2O14647 SAP18P2-201ENST00000434334 459 ntBASIC19.21■□□□□ 0.67
CHD2O14647 AC005077.3-201ENST00000449614 213 ntBASIC19.21■□□□□ 0.67
CHD2O14647 RNASEH2CP1-201ENST00000454281 502 ntBASIC19.21■□□□□ 0.67
CHD2O14647 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC19.21■□□□□ 0.67
CHD2O14647 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC19.21■□□□□ 0.67
CHD2O14647 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC19.21■□□□□ 0.67
CHD2O14647 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD2O14647 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC19.21■□□□□ 0.67
CHD2O14647 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms